BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006A09SP1|AL425464
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1629 0.0
>3x_Contig1555
Length = 10828
Score = 1629 bits (813), Expect = 0.0
Identities = 829/843 (98%)
Strand = Plus / Plus
Query: 1 cctctatggttaggaaaatttgcagtacaacatttcatagctgcataavaagagcaaatg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2463 cctctatggttaggaaaatttgcagtacaacatttcatagctgcataaaaagagcaaatg 2522
Query: 61 graccaaacccaatcatcaccaaagctacgaagatcaamaaaacgctgctatattcataa 120
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2523 gaaccaaacccaatcatcaccaaagctacgaagatcaaaaaaacgctgctatattcataa 2582
Query: 121 gtgtaacaaaagtvaagagtagaatatgcaaaavatgtaagasaggccccaattccggtg 180
||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2583 gtgtaacaaaagtaaagagtagaatatgcaaaaaatgtaagaaaggccccaattccggtg 2642
Query: 181 gccaaactgggcgaatggtctattatcattcctgcgaaaacacccatcgcactcatccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2643 gccaaactgggcgaatggtctattatcattcctgcgaaaacacccatcgcactcatccct 2702
Query: 241 aaagacatggcaaaggagaaatcactagatctttcaatgtcaagatggcattttttgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2703 aaagacatggcaaaggagaaatcactagatctttcaatgtcaagatggcattttttgagc 2762
Query: 301 vactgtggtgcatagaaactgtacatatacggtgtaccagaccccaaagctaccacattt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2763 aactgtggtgcatagaaactgtacatatacggtgtaccagaccccaaagctaccacattt 2822
Query: 361 gcaccaataaatattgavgccaattggtacttggvagcmggagtcatctttvattaatta 420
||||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||||
Sbjct: 2823 gcaccaataaatattgaagccaattggtacttggaagcaggagtcatctttaattaatta 2882
Query: 421 tbactgccaccaatgtgaaagtttgaccaatcttaatcttctgcactttaccagctctgt 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2883 ttactgccaccaatgtgaaagtttgaccaatcttaatcttctgcactttaccagctctgt 2942
Query: 481 agttaacagttctgtagcggtacccacaaaagtgattcacttctgtgtacctcacgatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2943 agttaacagttctgtagcggtacccacaaaagtgattcacttctgtgtacctcacgatct 3002
Query: 541 taaattgaagagcccaaratatcaaggacatggttgcttaaatatgtagatgctgccaac 600
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3003 taaattgaagagcccaaaatatcaaggacatggttgcttaaatatgtagatgctgccaac 3062
Query: 601 tctctgattttgacatttttcgaatctcgagacaattcgcaggtcaccataattgataac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3063 tctctgattttgacatttttcgaatctcgagacaattcgcaggtcaccataattgataac 3122
Query: 661 gaactaacgcaaggaaaaacatggggttgaccgagtacaagaggaagattttagcagtat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3123 gaactaacgcaaggaaaaacatggggttgaccgagtacaagaggaagattttagcagtat 3182
Query: 721 tatgacgctgagtggcctctcctggtgatagtcattttgcggacacaggagttgatgttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3183 tatgacgctgagtggcctctcctggtgatagtcattttgcggacacaggagttgatgttt 3242
Query: 781 ctctatgttgaacctgtctgtttttacgaataatagatcatgtgacttatgtdattgttg 840
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3243 ctctatgttgaacctgtctgtttttacgaataatagatcatgtgacttatgtaattgttg 3302
Query: 841 cga 843
|||
Sbjct: 3303 cga 3305
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4436
Number of Sequences: 1807
Number of extensions: 4436
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 1
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)